Saturday, 30 January 2021

SIMPLY EXPLAINED: What is mRNA, what does it do, what is its role in a Covid-19 vaccine? How can we be sure that a mRNA-based Covid-19 vaccine is safe?

 (Source: Moderna, 

https://www.modernatx.com/mrna-technology/science-and-fundamentals-mrna-technology)


What does mRNA do? mRNA produces instructions to make proteins that may treat or prevent disease


mRNA medicines aren’t small molecules, like traditional pharmaceuticals. And they aren’t traditional biologics (recombinant proteins and monoclonal antibodies) – which were the genesis of the biotech industry. Instead, mRNA medicines are sets of instructions. And these instructions direct cells in the body to make proteins to prevent or fight disease.

It’s actually basic human biology. 

DNA (deoxyribonucleic acid) is a double-stranded molecule that stores the genetic instructions your body’s cells need to make proteins. Proteins, on the other hand, are the ‘workhorses’ of the body. Nearly every function in the human body – both normal and disease-related – is carried out by one or many proteins.

mRNA is just as critical as DNA.

Without mRNA, your genetic code would never get used by your body. Proteins would never get made. And your body wouldn’t – actually couldn’t – perform its functions. Messenger ribonucleuc acid, or mRNA for short, plays a vital role in human biology, specifically in a process known as protein synthesis. mRNA is a single-stranded molecule that carries genetic code from DNA in a cell’s nucleus to ribosomes, the cell’s protein-making machinery.

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mRNA’s role in protein synthesis

 

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  • Through a process known as transcription, an RNA copy of a DNA sequence for creating a given protein is made.
  • This copy – mRNA – travels from the nucleus of the cell to the part of the cell known as the cytoplasm, which houses ribosomes. Ribosomes are complex machinery in the cells that are responsible for making proteins.
  • Then, through another process known as translation, ribosomes ‘read’ the mRNA, and follow the instructions, creating the protein step by step. 
  • The cell then expresses the protein and it, in turn, carries out its designated function in the cell or the body. 


Using mRNA to develop a new category of medicines.


At Moderna, we are leveraging the fundamental role that mRNA plays in protein synthesis. We have developed proprietary technologies and methods to create mRNA sequences that cells recognize as if they were produced in the body. We focus on diseases where enabling targeted cells to produce – or turn ‘on’ – one or more given proteins will enable the body to fight or prevent a given disease.

  • We start with our desired sequence for a protein.
  • We design and synthesize the corresponding mRNA sequence – the code that will create that protein.
  • Before synthesis, we also engineer that mRNA sequence to optimize the mRNA’s physical properties, as well as those of the encoded protein.
  • We deliver the mRNA sequence to the cells responsible for making that protein via one of several modalities. Reaching different types of cells requires different delivery methods.
  • And, once the mRNA – the instructions – are in the cell … human biology takes over. Ribosomes read the code and build the protein, and the cells express the protein in the body.

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(Source: CDC Centers for disease control and prevention

https://www.cdc.gov/coronavirus/2019-ncov/vaccines/different-vaccines/mrna.html)


Vaccines Are New, But Not Unknown


Researchers have been studying and working with mRNA vaccines for decades. Interest has grown in these vaccines because they can be developed in a laboratory using readily available materials. This means the process can be standardized and scaled up, making vaccine development faster than traditional methods of making vaccines.

mRNA vaccines have been studied before for flu, Zika, rabies, and cytomegalovirus (CMV). As soon as the necessary information about the virus that causes COVID-19 was available, scientists began designing the mRNA instructions for cells to build the unique spike protein into an mRNA vaccine.

Future mRNA vaccine technology may allow for one vaccine to provide protection for multiple diseases, thus decreasing the number of shots needed for protection against common vaccine-preventable diseases.

Beyond vaccines, cancer research has used mRNA to trigger the immune system to target specific cancer cells.


A Closer Look at How COVID-19 mRNA Vaccines Work


COVID-19 mRNA vaccines give instructions for our cells to make a harmless piece of what is called the “spike protein.” The spike protein is found on the surface of the virus that causes COVID-19.

COVID-19 mRNA vaccines are given in the upper arm muscle. Once the instructions (mRNA) are inside the immune cells, the cells use them to make the protein piece. After the protein piece is made, the cell breaks down the instructions and gets rid of them.

Next, the cell displays the protein piece on its surface. Our immune systems recognize that the protein doesn’t belong there and begin building an immune response and making antibodies, like what happens in natural infection against COVID-19.

At the end of the process, our bodies have learned how to protect against future infection. The benefit of mRNA vaccines, like all vaccines, is those vaccinated gain this protection without ever having to risk the serious consequences of getting sick with COVID-19.

COVID-19 mRNA Vaccines cannot give someone COVID-19.

  • mRNA vaccines do not use the live virus that causes COVID-19.

They do not affect or interact with our DNA in any way.

  • mRNA never enters the nucleus of the cell, which is where our DNA (genetic material) is kept.
  • The cell breaks down and gets rid of the mRNA soon after it is finished using the instructions.

Thursday, 17 December 2020

Origins and history of Y DNA Haplogroup J2

This short paper by Maciano Hay provides a good insight into the origin and distribution of this Y DNA Haplogroup to which I belong.

https://www.academia.edu/6089464/Origins_and_history_of_Haplogroup_J2_Y_DNA_?auto=download&email_work_card=download-paper

Wednesday, 9 December 2020

Sanauli's Mysterious Warriors by Disha Ahluwalia: a symbiosys of IVC and Steppe warriors?


 The Sanaulians coexisted with the late Harappan (Indus Valley Civilisation IVC) and I am of the opinion that this society was a symbiosys of IVC and the warriors from the Steppes.

Tuesday, 17 November 2020

Recommended literature on DNA and genetic genealogy, some free, other available on Amazon as well as to understand the mRNA-based COVID-19 vaccines

1. Family Tree DNA Learning Center, Glossaryhttps://learn.familytreedna.com/glossary/

2. International Society of Genetic Genealogy Glossaryhttps://isogg.org/wiki/Genetics_Glossary

3. Emily D. Aulicino, Genetic Genealogy: The Basics and Beyond 

4. Calladine, Horace R. Drew, “Understanding DNA, The molecule and how it works” 

5. Y-DNA Haplogroup Tree: International Society of Genetic Genealogy ISOGG, Y- DNA Haplogroup 

6. mtDNA Haplogroup Tree, PhyloTree mt, van Oven M, Kayser M. 2009. Updated comprehensive 
   phylogenetic tree of global human mitochondrial DNA variation. Hum Mutat 30(2):E386-E394. 
   http://www.phylotree.org. doi:10.1002/humu.20921

7. David Reich, “Who We Are and How We Got Here. Ancient DNA and the new science of the human 
    past”

8. Narasimhan et al. “The formation of human populations in South and Central Asia”,  

9.  Messenger RNAhttps://www.sciencedirect.com/topics/pharmacology-toxicology-and- 
     pharmaceutical-science/messenger-rna

10. CRISPR: Jennifer Doudna, Samuel H. Sternberg: “A Crack in Creation: Gene Editing and the 
      Unthinkable Power to Control Evolution”. 
      Jennifer Doudna was awarded the 2020 Nobel prize in chemistry

The last two on mRNA (9) and CRISPR-CAS9 (10) are very helpful to better understand the development of the BioNTech/Pfizer and MODERNA/AstraZeneca COVID-19 vaccines.

Monday, 31 August 2020

Thanks to DNA, wrongly accused man released after 37 years in Florida jail, some of those years on death row

A Florida man who spent the last 37 years in prison on a rape and murder charge was released Thursday, hours after officials revealed dramatic new evidence that proved his innocence.

Robert DuBoise walked out of the Hardee Correctional Institution in Bowling Green, Florida, shortly after 2 p.m. With him were his mother and sister.

“It’s an overwhelming sense of relief,” Robert DuBoise told reporters outside the prison. “I prayed to God every day and hoped for it.”

The 56-year-old was serving a life sentence, having been convicted in 1983 for the murder of 19-year-old Barbara Grams. She had been raped and beaten while walking home from her job at a Tampa mall.

Read the story using the link below:

https://www.winknews.com/2020/08/28/innocent-florida-inmate-released-after-37-years/

Saturday, 22 August 2020

Ancestral South Indians ASI and Ancestral North Indians ANI

The past belief that Dravidians inhabited India and were chased away to the South by Aryans who came from the North is no longer sustainable. The genetics of Indians is far more complex and in its simplest form can be expressed as a mixture of Ancestral South Indians ASI and Ancestral North Indians ANI in differing proportions. The ASI and ANI were themselves mixtures of other populations. The following article is a MUST READ for anyone who is interested in how genetics has discovered who Indians really are. Alternately, read my book for more details!!!

https://scholar.harvard.edu/files/vagheesh/files/eaat7487.full_.pdf

Tuesday, 11 August 2020

History of Khazan land management in Goa: ecological, economic and political perspective by Prof. Nandkumar Kamat

My ancestors, the Prabhu clan, were invited to initiate the 4th vangad of Aldona's gaunkari system (comunidade) because of their expertise in reclaiming land and building sluice gates. The following excellent paper by Goa University Professor Nandkumar Kamat explains in clear language and terminology everything we need to know on Khazan (or Khajan) land. This article is a must read for every Goan and everyone else who is interested in Goa's history:

https://www.researchgate.net/publication/283475605_History_of_Khazan_land_management_in_Goa_ecological_economic_and_political_perspective